Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme37847g00001 ACATTGCTTTACAGGAGTGATCATGATCATGATCATGTAAATCTACTGCATAGATGGAAAGAGATTTTAGGTTGGCAATGGCATGAACTGCATTCTGAAAGGTTGCAGAATACATTTTCTGCTAATTTTGATGATTCTTTTCACTTGGAAATTTTGAAGGAAGCGTTGTTGAGAGCAATCCATGATATTGATGCGAAGTTTTCTGAGGAAGCCTCTAGAAATAACCTTCATTCAGGATCTACAGCAACAATTGTATTGGTTGCAGATGATAAAATTTTGGTTGCCAATATTGGAGACTCTAAGGCTTTCATTTGCTCTGAAAGTTTTCAGTCTCCTGAGGAGGCTAAAGGTGAGAAAGATTATGAAATATAA 372 0.3629 TLLYRSDHDHDHVNLLHRWKEILGWQWHELHSERLQNTFSANFDDSFHLEILKEALLRAIHDIDAKFSEEASRNNLHSGSTATIVLVADDKILVANIGDSKAFICSESFQSPEEAKGEKDYEI 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme37847g00001 123 Pfam Protein phosphatase 2C 15 107 IPR001932 -
Trme37847g00001 123 SUPERFAMILY PP2C-like 24 108 IPR036457 -
Trme37847g00001 123 Gene3D - 3 118 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme37847g00001 Trme-Chr37847 55 1036 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme37847g00001 28 117 PP2C-type Phosphatase Gene Family AT3G63320 60.000 4.84e-31 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme37847g00001 - - psat:127122173 225.328