Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme37803g00001 CAAGCCAAAGACATAGGATTAGTAAATGCAGGACAATATCTTGAAGATAAATATGGTGGTGGATTTTTTCCAATTCTTTATATTTGGGGTATCGGTTTATTAGCAGCTGGACAAAGTAGCACGATTACTGGTACCTATGCTGGACAATTTATAACTGAAGGTTCTTTGGATACTTTGAATGAATGGCTTAATGTCCTTCAAGCTATACAAATTCCTTTTGCACTTATTCCTCTTCTTACTTTGGTTTCTAAACAAGAGGTTATGGGAACATTTAGAATTGGGCCTCTTTTAGAGTTTATAGCTAAAGCGCTTATCATGGTAAGTGCTTATGTATAA 336 0.3512 QAKDIGLVNAGQYLEDKYGGGFFPILYIWGIGLLAAGQSSTITGTYAGQFITEGSLDTLNEWLNVLQAIQIPFALIPLLTLVSKQEVMGTFRIGPLLEFIAKALIMVSAYV 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme37803g00001 111 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 2 65 IPR001046 GO:0016020|GO:0030001|GO:0046873
Trme37803g00001 111 Pfam Natural resistance-associated macrophage protein 6 56 IPR001046 GO:0016020|GO:0030001|GO:0046873
Trme37803g00001 111 Pfam Natural resistance-associated macrophage protein 58 94 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme37803g00001 Trme-Chr37803 184 716 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme37803g00001 1 107 Inorganic Solute Cotransporters AT1G47240 57.241 9.29e-47 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme37803g00001 K21398 - lang:109356302 175.252