Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme37790g00001 ATGTCTTCGGGGTTCGATCTTTCGGGTTTGTTTGAGGAAAAGAAAAAATGGGGTTCGGTTTTTACTTCAAAGTGTTCGGTTTCGGAGATTGTGACAAAAATCGAAAGTGCTGCGAAAAATTTAAAGTTTAAGGTTAAGAAGGTTAAGGATTTCAAACTGAAGTTACAAGGGTCTTTTGAAGGGAGAAAAGGAAAGTTGGCCGTGTCGGCGGAGATATACGAGGTGGCGCCGGAGCTTGCAGTGGTTGAATTTTCCAAGAGTTCCGGTGATACTTTTGAATATGTTAAGGTGTTTGAAGAAGATGTTAGGCCTGCTCTAAAAGACATTGTTTGGTCATGGCAAGGGGAGGGATGCCACGTGTAA 363 0.4242 MSSGFDLSGLFEEKKKWGSVFTSKCSVSEIVTKIESAAKNLKFKVKKVKDFKLKLQGSFEGRKGKLAVSAEIYEVAPELAVVEFSKSSGDTFEYVKVFEEDVRPALKDIVWSWQGEGCHV 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme37790g00001 120 Gene3D Kinase associated domain 1, KA1 1 112 - -
Trme37790g00001 120 Pfam NAF domain 1 47 IPR004041 GO:0007165
Trme37790g00001 120 CDD CIPK_C 1 107 - -
Trme37790g00001 120 FunFam Non-specific serine/threonine protein kinase 1 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme37790g00001 Trme-Chr37790 47 409 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme37790g00001 1 117 CBL-interacting serine-threonine protein kinases AT5G10930 60.684 1.07e-47 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme37790g00001 - - qsa:O6P43_015759 166.392