Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme37785g00001 GGGTTTGGTAAAGTGTTCAAAGGCTGGATAAGCTGTAATCAGAGTCCATCTTCAAATCCAAAGATGCCAGTTGCTATAAAGACTCTTAATAGAGAAGGACCCCAAGGTCACAAAGAATGGGAGGCTGAAATTAACTGTCTTGGTGCTCTCCAACACCCAAATTTGGTTCAACTTATTGGCTACTGCCATGAAGATGAAAATAGAATGCTTGTTTATGAGTATATGCCAAAAGGTTGCCTTGAAAATCATTTGTTTAGGAGGTTAGCACCTCTACCATGGACTGTGAGAATGAAAATTATGCTTGGTGCTGCAAAAGGCCTTGCATTTCTCCATG 334 0.4072 GFGKVFKGWISCNQSPSSNPKMPVAIKTLNREGPQGHKEWEAEINCLGALQHPNLVQLIGYCHEDENRMLVYEYMPKGCLENHLFRRLAPLPWTVRMKIMLGAAKGLAFLH 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme37785g00001 111 SUPERFAMILY Protein kinase-like (PK-like) 1 111 IPR011009 -
Trme37785g00001 111 PANTHER OS01G0588500 PROTEIN-RELATED 1 111 - -
Trme37785g00001 111 Gene3D Transferase(Phosphotransferase) domain 1 1 111 - -
Trme37785g00001 111 ProSiteProfiles Protein kinase domain profile. 1 111 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme37785g00001 111 Pfam Protein tyrosine and serine/threonine kinase 2 111 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme37785g00001 Trme-Chr37785 2 1073 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme37785g00001 1 111 Receptor kinase-like Gene Family AT5G39000 47.826 4.29e-28 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Trme37785g00001 PK_Tyr_Ser-Thr 6e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme37785g00001 - - tpra:123891935 187.193