Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme37739g00001 CCTGAATATATCAATGGAGGAAGGGCTAGTAAAGAATCTGATATGTATAGTTTTGGTATTGTTGCTTTGGAGCTAGCAACTGGTAGAAGGATTTTTCAAGATGGTGAGTTTCATGTGCCTTTGATGAATTGGGTTTGGGGACTTTATGTTGAAGGGAATCTTATGAGTGCTGTTGATGAAAGATTGAATTTGGAGTTTGATGTTAATGAAATGAAGAGTTTGCTTATTGTAGGGTTATGGTGTACTCATTCAAATGATAAAGAAAGACCTAAAGCTTATGAAGTGATTAAGGTTCTTAATCATGAAATGGCATTACCTGAACTTCCACTTGATATGCATGATCATGCTCCTCCAATTATGAAACTTTTGGTTAATCCCCTTTTAAGGCCTTTACCATTTTATCATTACACTGACTAA 417 0.3525 PEYINGGRASKESDMYSFGIVALELATGRRIFQDGEFHVPLMNWVWGLYVEGNLMSAVDERLNLEFDVNEMKSLLIVGLWCTHSNDKERPKAYEVIKVLNHEMALPELPLDMHDHAPPIMKLLVNPLLRPLPFYHYTD 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme37739g00001 138 SUPERFAMILY Protein kinase-like (PK-like) 1 116 IPR011009 -
Trme37739g00001 138 Gene3D Transferase(Phosphotransferase) domain 1 1 116 - -
Trme37739g00001 138 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 1 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme37739g00001 Trme-Chr37739 1 632 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme37739g00001 1 112 Receptor kinase-like Gene Family AT5G10530 47.009 5.04e-29 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Trme37739g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme37739g00001 - - lja:Lj0g3v0345799.1 204.912