Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme377397g00001 GGTCCAGGTGATTTTTGTGGCGAGGAGCTTTTGACATGGGCGTTGGATCCACGACCGAGTATGGTAATTCCTTCTTCGACTCGAACGGTTCAAGCCATATCTGAAGTAGAAGGCTTTGCACTTATAGCAGAAGATTTGAAGTTTGTTGCATCTCAGTTTAGAAGATTGCATAGCAAGCAATTGAGGAACAAGTTAAGGTTTCACTCGCACCAATGGAGAACATGGGCTGCTTGTTTTATACAAGTTGCATGGAGACGTAAGGTACAAGAAAAGAAAGGTAGTTATTGA 288 0.4271 GPGDFCGEELLTWALDPRPSMVIPSSTRTVQAISEVEGFALIAEDLKFVASQFRRLHSKQLRNKLRFHSHQWRTWAACFIQVAWRRKVQEKKGSY 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme377397g00001 95 Gene3D Jelly Rolls 1 55 IPR014710 -
Trme377397g00001 95 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 2 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme377397g00001 Trme-Chr377397 3 290 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme377397g00001 1 91 Ion Channels AT2G28260 80.220 2.90e-48 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme377397g00001 K05391 - gmx:100786868 169.859