Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme37696g00001 ATGTCTGCGACGGAGTTTTTTACTTTGGGAGGGAAAACCACTGCTTCTAGAGTCCTTAGAGTTGAAGGGACAACTTATGATCCAAAAGATGGAGGAATTGTTGATTGGACTTGCTATAACATGGATGCTAACTTGTTAGCTATGGCAGAAATATGCGCTGTTTGTAATGATGCCGGGGTTTATTTTGACGGTCGCTTATTTCGAGCCACAGGTTTGCCTACTGAAGCTGCTCTCAAAGTTTTGGTTGAAAAGATGGGGTTTCCTGATATTAAGTCAAGGAACAAAACTCGCGATGCACAAGTTTCAACAAACAACATGAATGATTGCAATACTTTGAAGCTAGGCTGTTGTGAGTGGTGGAATAGAAGATCCAAAAGGGTAGCTACATTGGAGTTTGACCGTGTTAGGAAGTCAATGAGTGTTATTGTTCGCGAACCTGATGGGCAAAATCGGCTTCTGGTCAAGGGTGCTGTTGAGAGTTTATTGGAGCGAAGTTCGTATGTGCAACTTGCCGATGGATCTCTTGTTCCAATAGATGATCAATGTAGGGAACTACTTCTTCAAAGACTCCATGAGATGAGTTCGAAGGGATTGCGTTGCTTAGGTTTGGCATGTAAGGATGAGTTGGGAGAATTTTCAGACTATTATGCAGACACTCATCCTGCTCACAAGAAATTGCTTG 682 0.4252 MSATEFFTLGGKTTASRVLRVEGTTYDPKDGGIVDWTCYNMDANLLAMAEICAVCNDAGVYFDGRLFRATGLPTEAALKVLVEKMGFPDIKSRNKTRDAQVSTNNMNDCNTLKLGCCEWWNRRSKRVATLEFDRVRKSMSVIVREPDGQNRLLVKGAVESLLERSSYVQLADGSLVPIDDQCRELLLQRLHEMSSKGLRCLGLACKDELGEFSDYYADTHPAHKKLL 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme37696g00001 227 FunFam calcium-transporting ATPase, endoplasmic reticulum-type 1 227 - -
Trme37696g00001 227 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 1 216 IPR023299 GO:0000166
Trme37696g00001 227 Gene3D - 1 225 IPR023299 GO:0000166
Trme37696g00001 227 PANTHER CALCIUM-TRANSPORTING ATPASE 21 208 - -
Trme37696g00001 227 Pfam Cation transport ATPase (P-type) 54 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme37696g00001 Trme-Chr37696 38 1074 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme37696g00001 1 227 Primary Pumps ATPases(2) AT4G00900 71.366 3.61e-113 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme37696g00001 K01537 - cave:132186527 395.586