Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme37659g00001 ATGGGTTTTCGTTTACCTAGTATCATCAGATCAAGGGGATCATATTCAAAAGGTGTGGACGTGCCAAAGGGATATCTAGCCGTATATGTTGGAGATCAAATGAAACGGTTTGTAATTCCAATATCATACTTGAACCAACCATCATTTCAAGGGTTGTTGAACCAAACTGAGGAACAATTCGAATATGATCATCCAATGGGTGGTCTCACTATTCCATGTAGAGAAGACGTGTTCTTCGAGATAACTTCTCGCATTAGAAG 260 0.3962 MGFRLPSIIRSRGSYSKGVDVPKGYLAVYVGDQMKRFVIPISYLNQPSFQGLLNQTEEQFEYDHPMGGLTIPCREDVFFEITSRIR 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme37659g00001 86 Pfam Auxin responsive protein 16 84 IPR003676 GO:0009733
Trme37659g00001 86 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 18 84 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme37659g00001 Trme-Chr37659 356 615 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme37659g00001 20 78 Calmodulin-binding Proteins AT3G43120 52.542 1.88e-17 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme37659g00001 K14488 - gmx:100782363 128.257