Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme37635g00001 ATGCTTATTCTTGGTGCCACTAATCGACCATTTGACCTTGATGATGCTGTGATTCGTCGTCTCCCAAGACGGATTTATGTGGATCTACCCGATGCTGCTAATCGTGTAAAGATTCTGAACGTGATTCTTGCTCATGAACATCTAGAATCCGGGTTCTCTTTTGAGAAACTGGCATATGAAACTGAAGGCTATTCAGGGAGTGATTTGAAGGCTATTCAGTNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNGTTTCTGTCAGATTACGTATTTTCTTGATTCTTTGTCGAGATTTCATCTACTGTCAGTGCTCATCTTCACTGTCTTGCCCTGCAATAACAGGACGCTCTTTCCGGATTTATCCAAGATGAATTGCAAAGAGCATCCACTACTTCACAGTAGACGAGAATCTTAG 456 0.3531 MLILGATNRPFDLDDAVIRRLPRRIYVDLPDAANRVKILNVILAHEHLESGFSFEKLAYETEGYSGSDLKAIQXXXXXXXXXXXXXXXXXXXXXXXXXFCQITYFLDSLSRFHLLSVLIFTVLPCNNRTLFPDLSKMNCKEHPLLHSRRES 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme37635g00001 151 Coils Coil 69 73 - -
Trme37635g00001 151 Gene3D - 30 73 - -
Trme37635g00001 151 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 73 IPR027417 -
Trme37635g00001 151 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 2 72 - -
Trme37635g00001 151 Gene3D - 2 29 IPR027417 -
Trme37635g00001 151 ProSitePatterns AAA-protein family signature. 1 20 IPR003960 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme37635g00001 Trme-Chr37635 157 762 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme37635g00001 1 72 Calmodulin-binding Proteins AT3G56690 37.333 3.67e-08 49.7