Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme3759g00001 TTCCATTTCTCAGTTTTCAATGCAACTTACCAAGTGGAACCACTCGGCGAAGATGATGCCTTGTCTTTGTTCTGTCACCACGCTTTCGGACAGAAATCAATCCCTTCCTCAGCTAATCAGAATTTAGTCAAACAGGTTGTGGCTGAGTGTGGAAAGCTTCCACTGGCTCTTAAAGTGATTGGAGCTTCGCTGCGAGATCAGAACGAAATGTTTTGGTTAAGTGTTAAAACAAGGCTTTCACAAGGGTTAAGCATAGGCGAATCCTATGAACTTAATCTGATTGATAGAATGGCAATTAGTACTAATTACTTGCCAGAAAAGATCAAAGAGTGCTTCTTGGACTTGTGTTCCTTTCCAGAGGATAAAAAGATTCCTCTAGAAGTTCTAATCAACATGTGGGTTGAAATCCATGATATTCATGAAACAGAAGCATATGCTATTGTCGTTGAGCTTTCGAACAAGAATCTCCTCACCTTAGTGAAAGAGGCACGTGCTGGGGGAATGTATAGCAGTTGCTTCGAGATTTCTATTACTCAACATGATATACTGAGAGATCTTGCACTTAATTTGAGTAATCGTGGAAGCGTTAATCAACGCCGAAGATTAGTAATGCCAAAACGAGATGATAATGGACAACTTCCTAAAGAATGGTTGAGACATGCRGATCAACCGTTCGAAGCTCAAATTGTTTCAATTCAGACAGGTGAAATGAGAAAATGCGATTGGTGTAATTTGGAATTTCCTAAAGCTGAAGTGCTGATTATTAATTTCACATCCAGTGAATACTTCTTACCTCCTTTCATTAATAGAATGCCAAATTTGAGAGCATTGATAGTAATAAACCACAGCACTTCGTATGCGCGTCTTCACAATATTTCGGTTTTGAAGAGTTTAACCAAATTGAGGAGCCTTTGGCTTGAAAAAGTTTCTATCCCACAGTTATCTGGCATAGTCATGGAAAGCTTGAGGAAATTGTTTATAGTCCTTTGTATGATTAACAACAGTCTTGAAGGAAAAGATTCAAACCTAGCCGATATCTTCCCGAACATCTCTGAGCTCACACTTGATCACTGTGAAGATCTAACTGAGTTTCCTTCGAGTATTTGTAAGATACAGTCACTAAAAAACTTGAGTCTCACTAACTGTCATAATTTGACACGATTACCAAATGAATTAGGCTCACTAAAATCTCTAGAGATTCTCCGGTTATATGCGTGTCCGGATTTGAGAACACTTCCTCCTAGCATCCGTGAAATGACTAGATTGAAGTATATCGACATTTCTCAATGTGTTAACCTTACAAGCTTCCCCGAAGCAATCGGTAAGTTGGTAAGTTTGGAGAAGATCGACATGAGGGAATGTCCGATGATTGCAAATATACCTAAGTCTACATTGTCATTGCATTCTTTGCAGCTTGTAATTTGTGATGAGGAAGTGTCTTCGACGTGGAAGGAAATTGGGAAGGCCAAGCCTAATCTCAATGTTCAAGTAGCAGAGATGCAATATGATCTAGATTGGTTAGATACCGACTAA 1533 0.3914 FHFSVFNATYQVEPLGEDDALSLFCHHAFGQKSIPSSANQNLVKQVVAECGKLPLALKVIGASLRDQNEMFWLSVKTRLSQGLSIGESYELNLIDRMAISTNYLPEKIKECFLDLCSFPEDKKIPLEVLINMWVEIHDIHETEAYAIVVELSNKNLLTLVKEARAGGMYSSCFEISITQHDILRDLALNLSNRGSVNQRRRLVMPKRDDNGQLPKEWLRHADQPFEAQIVSIQTGEMRKCDWCNLEFPKAEVLIINFTSSEYFLPPFINRMPNLRALIVINHSTSYARLHNISVLKSLTKLRSLWLEKVSIPQLSGIVMESLRKLFIVLCMINNSLEGKDSNLADIFPNISELTLDHCEDLTEFPSSICKIQSLKNLSLTNCHNLTRLPNELGSLKSLEILRLYACPDLRTLPPSIREMTRLKYIDISQCVNLTSFPEAIGKLVSLEKIDMRECPMIANIPKSTLSLHSLQLVICDEEVSSTWKEIGKAKPNLNVQVAEMQYDLDWLDTD 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme3759g00001 510 Gene3D - 95 186 IPR036388 -
Trme3759g00001 510 PRINTS Disease resistance protein signature 50 64 - -
Trme3759g00001 510 PRINTS Disease resistance protein signature 417 433 - -
Trme3759g00001 510 Pfam NB-ARC domain 9 95 IPR002182 GO:0043531
Trme3759g00001 510 Gene3D - 15 92 IPR042197 -
Trme3759g00001 510 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 115 IPR027417 -
Trme3759g00001 510 Gene3D Ribonuclease Inhibitor 216 492 IPR032675 -
Trme3759g00001 510 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 5 507 IPR039203 GO:0050832
Trme3759g00001 510 SUPERFAMILY L domain-like 251 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme3759g00001 Trme-Chr3759 79 1919 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme3759g00001 310 459 WRKY Transcription Factor Family AT4G12020 31.169 2.68e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme3759g00001 - - aprc:113874975 808.135