Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme3756g00001 TTTTATGTGGCAGAAGTTCTCCTTGCTTTGGAGTTCTTGCACATGCTTGGGATAATCTATGGAGACCTTAAACCTGAGAATATGTTGGTGAGAGAAGAGGGTCATATAATGTTTTCAGATTTCGATCTCTCTCTAAGCCTGCCTGCATTCAGCCAACATGTGCAATGCAGCCAGTCTGCATCCAAGCTGCATAATTTTTGCCGCGCTTCCTATCCGGAAAATCCAAGAAACTGGAAAGAGAGAAAATTCAGACAAAAGAATGACACACATCAGCAAGTGACACCTCTCCCAGAGCTAATCGCCGAGCCAACAAGTGCGCGATCGTTGTCCATTGTAGGCACACACGAGTACTTGGCACCTGAAATTATTAAAGGCGAAAGGACATGGCAATGCTGTGGATTGGTGTGGACGTCCGGGATATGCTTATACGAACTCTTGTTTGGTCGAACACCATTCAAAGGCATTCAAAGGTTCAGTGAACCGAGCAACCCTGTTTAA 498 0.4518 FYVAEVLLALEFLHMLGIIYGDLKPENMLVREEGHIMFSDFDLSLSLPAFSQHVQCSQSASKLHNFCRASYPENPRNWKERKFRQKNDTHQQVTPLPELIAEPTSARSLSIVGTHEYLAPEIIKGERTWQCCGLVWTSGICLYELLFGRTPFKGIQRFSEPSNPV 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme3756g00001 165 PANTHER FLIPPASE KINASE 1-RELATED 1 157 - -
Trme3756g00001 165 Pfam Protein kinase domain 109 156 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme3756g00001 165 Pfam Protein kinase domain 1 49 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme3756g00001 165 SUPERFAMILY Protein kinase-like (PK-like) 2 156 IPR011009 -
Trme3756g00001 165 ProSitePatterns Serine/Threonine protein kinases active-site signature. 18 30 IPR008271 GO:0004672|GO:0006468
Trme3756g00001 165 ProSiteProfiles Protein kinase domain profile. 1 165 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme3756g00001 165 Gene3D Transferase(Phosphotransferase) domain 1 1 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme3756g00001 Trme-Chr3756 156 729 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme3756g00001 1 154 AGC Kinase Gene Family AT5G47750 56.180 8.99e-50 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Trme3756g00001 Pkinase 5.1e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme3756g00001 K08286 - adu:107493855 176.407