Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme37562g00001 ATGTGGTTACCTTCTTTTGGTTTGGTTGCTGATGTTATAAATTGCTTTCAGATTCTTATTGGTCCTTCTGATTGGGAAGACCATTCCAAAGGAAAGGAAGGATCTACCAGATACAGGATTCACAACCTTCCTCAGAAATTGGGTCCGGGAGTGTACGAGCTTGGAGTAGCTGTGTCGTATAGTGGTTTGGGGCGTGAAATTTACAAGCTTACCACTGACCCTCGCCGTGTAGTTGTGGTTTACCTTGGAAAAGCTGRCAATGTGAGAGCAAGACTCCAGCGTTATGGAAGGACTGGAGCTCATTTGAGTAATAGCTGTTCAACGGATGATTCATCTCTTCAAAAGGGAAGGTCATTGTTTCAGGAGATATTTTTGCAAGGTTTCCCAATTGTTTATAGATGGGCTCCT 408 0.4338 MWLPSFGLVADVINCFQILIGPSDWEDHSKGKEGSTRYRIHNLPQKLGPGVYELGVAVSYSGLGREIYKLTTDPRRVVVVYLGKAXNVRARLQRYGRTGAHLSNSCSTDDSSLQKGRSLFQEIFLQGFPIVYRWAP 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme37562g00001 136 Pfam GIY-YIG domain-containing protein 16 136 - -
Trme37562g00001 136 PANTHER PROTEIN EFFECTOR OF TRANSCRIPTION 2-RELATED 17 136 IPR038909 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme37562g00001 Trme-Chr37562 435 842 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme37562g00001 12 136 HRT Transcription Factor Family AT5G56780 48.855 7.63e-32 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme37562g00001 - - vra:106762033 170.629