Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme375190g00001 ATGGTTGCTCACTCCAAAGATCAGACCAAGTTCAGAGCTGAAGATCACAAGACCCTTCGTAGACTTGCTCAGAATCGTGAGGCGGCAAGGAAGAGCCGGTTACGGAAGAAGGTAAACAGTCTCCATATCTGCATTTTTATTGTAGACTACGGGGTAACCGAATTCATAAGTTAG 174 0.454 MVAHSKDQTKFRAEDHKTLRRLAQNREAARKSRLRKKVNSLHICIFIVDYGVTEFIS 57
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme375190g00001 57 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 20 35 IPR004827 GO:0003700|GO:0006355
Trme375190g00001 57 Gene3D - 16 42 - -
Trme375190g00001 57 SUPERFAMILY Leucine zipper domain 17 38 IPR046347 GO:0003700|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme375190g00001 1 37 bZIP Transcription Factor Family AT1G68640 62.162 3.61e-10 51.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Trme375190g00001 bZIP_2 8.5e-05 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme375190g00001 K14431 - gmx:100777181 61.2326