Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Trme37517g00001 ATGTATAATCCTGATACATGCTCTCTTTGGTTTTGTGATTCCAAATACAATGCTGAGAACAGTGTTACCTTTAAGGTTGGTAGATTTGTTCAGCATATGAATATGAATTTTGCTGACCAGTATGCATTTGGAAAGATGTTGGTGTTTGGATCAAAGGTGAAGGGGTTGTGGCTTTTCAATGGGCAAGCAATCCCAAAAGGTTTGTTTGATGAATGCTATGACATGAAGTTGTATGAATGGACTAAGGTCGACATCTCTGATGAAGCTCAAAAGGTGCGTGTCAATCAGATGATCGAAGATTGTGAGGATTTCGAGGGGGAGACTATTAGGGAGATTTACTTTAAGTACTAG 351 0.3903 MYNPDTCSLWFCDSKYNAENSVTFKVGRFVQHMNMNFADQYAFGKMLVFGSKVKGLWLFNGQAIPKGLFDECYDMKLYEWTKVDISDEAQKVRVNQMIEDCEDFEGETIREIYFKY 116
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Trme37517g00001 116 PANTHER ELONGATION FACTOR 1-GAMMA 1-RELATED 1 110 IPR044628 GO:0004364
Trme37517g00001 116 SUPERFAMILY eEF1-gamma domain 2 111 IPR036433 GO:0003746|GO:0006414
Trme37517g00001 116 Gene3D Translation elongation factor EF1B, gamma chain, conserved domain 1 115 IPR036433 GO:0003746|GO:0006414
Trme37517g00001 116 ProSiteProfiles Elongation factor 1 (EF-1) gamma C-terminal domain profile. 1 114 IPR001662 GO:0003746|GO:0006414
Trme37517g00001 116 SMART EF1G_2 1 63 IPR001662 GO:0003746|GO:0006414
Trme37517g00001 116 Pfam Elongation factor 1 gamma, conserved domain 2 62 IPR001662 GO:0003746|GO:0006414
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Trme37517g00001 Trme-Chr37517 353 703 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme37517g00001 1 109 Eukaryotic Initiation Factors Gene Family AT1G57720 64.103 1.18e-43 145
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme37517g00001 K03233 - tpra:123896407 214.542