Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme37483g00001 ATGATTCTTGTCTCCTCCGATGTTGGAATAAGTTATCCTGATGTCACATTAGTCATACAGGTAGGAATTCCTTCAGACCGTGAACAATATATACATCGTCTAGGAAGAACAGGGCGGGAAGGCAAAGAAGGAGAAGGCATATTGCTGATTGCACCATGGGAAGAGTATTTTTTAAATAAGATCAAGGATCTCCCTCTAGAGAAATTCCCCTTGCCAGATTTAGATCCACAGGCACAGCTTAAGATTGAGCAATCAATGGCTAAGATTGATAACGACATCAAAGAAGCAGCTTATCATGCTTGGCTTTGTTATTACAACTCCATCATGGAGATTGGGAGGGAGAAGACCACAGTAGCTGAGCTGGCAAACCGATTTTCTGAATCAATTGGTTTACAGAGGCCGCCTTCTCTCTTCCGAAAAACTGCACTAAAAATGGGTTTGAAAGACATTCCAGGCATCAGAATTCGCAGATAG 474 0.4219 MILVSSDVGISYPDVTLVIQVGIPSDREQYIHRLGRTGREGKEGEGILLIAPWEEYFLNKIKDLPLEKFPLPDLDPQAQLKIEQSMAKIDNDIKEAAYHAWLCYYNSIMEIGREKTTVAELANRFSESIGLQRPPSLFRKTALKMGLKDIPGIRIRR 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme37483g00001 157 Gene3D - 1 142 IPR027417 -
Trme37483g00001 157 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1 86 IPR001650 -
Trme37483g00001 157 PANTHER RNA HELICASE 2 86 - -
Trme37483g00001 157 Pfam Helicase conserved C-terminal domain 4 40 IPR001650 -
Trme37483g00001 157 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 77 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme37483g00001 Trme-Chr37483 104 1049 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme37483g00001 2 66 Eukaryotic Initiation Factors Gene Family AT3G19760 35.526 1.02e-09 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme37483g00001 - - lja:Lj4g3v2917670.1 268.855