Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme37456g00001 ATGGTAGGAAGTGCTTACTATGTTGCTCCTGAGGTACTGCGTCGTAATTATGGAAAGGAAATAGACATTTGGAGCGCAGGCATCATATTGTATATTCTCCTTAGTGGTGTACCACCTTTTTGGGCTGAAACTGAAAAGGGAATATTTAATGCCATATTGGAAGGTGAACTTGACTTTGTTAGTGAACCATGGCCATCAATATCAGACAGTGCTAAAGATCTAGTCAGAAAGATGCTGACACAGGATCCAAAGAAGAGGATTACTTCTATCCAAGTCCTTG 280 0.4071 MVGSAYYVAPEVLRRNYGKEIDIWSAGIILYILLSGVPPFWAETEKGIFNAILEGELDFVSEPWPSISDSAKDLVRKMLTQDPKKRITSIQVL 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme37456g00001 93 ProSiteProfiles Protein kinase domain profile. 1 93 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme37456g00001 93 Pfam Protein kinase domain 2 92 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme37456g00001 93 FunFam Calcium-dependent protein kinase SK5 8 93 - -
Trme37456g00001 93 SUPERFAMILY Protein kinase-like (PK-like) 1 93 IPR011009 -
Trme37456g00001 93 Gene3D Transferase(Phosphotransferase) domain 1 1 93 - -
Trme37456g00001 93 PANTHER SERINE/THREONINE-PROTEIN KINASE 2 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme37456g00001 Trme-Chr37456 181 564 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme37456g00001 1 93 EF-hand Containing Proteins AT1G50700 84.946 7.74e-54 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Trme37456g00001 Pkinase 2.9e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme37456g00001 K13412 - gmx:100816859 184.496