Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme37424g00001 ATGGGCTATGGTCTAACTGAAAGTGGAGGAGGGGCAGCAAGAATGATAGGGTTTGATGAGGCTAAGCACCATGGTTCTGTGGGTCGACTAGCAGAAAATATGGAGGCCAAGATAGTCGACCCTGTTACAGGAGAGGCATTATCTCCGGGCCAGAAAGGGGAGCTTTGGTTGCGAGGACCAACAATCATGAAAGGTTATGTAGGAGATGACAAGGCAACTGTTGAGACATTGGATTCAGAGGGATGGCTGAAGACTGGCGATCTTTGTTATTTTGAC 276 0.4819 MGYGLTESGGGAARMIGFDEAKHHGSVGRLAENMEAKIVDPVTGEALSPGQKGELWLRGPTIMKGYVGDDKATVETLDSEGWLKTGDLCYFD 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme37424g00001 92 Pfam AMP-binding enzyme 2 92 IPR000873 -
Trme37424g00001 92 Gene3D - 2 20 - -
Trme37424g00001 92 SUPERFAMILY Acetyl-CoA synthetase-like 2 92 - -
Trme37424g00001 92 Gene3D Luciferase; Domain 3 21 92 - -
Trme37424g00001 92 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 2 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme37424g00001 Trme-Chr37424 1 839 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme37424g00001 2 92 Monolignol Biosynthesis Gene Families AT5G63380 72.527 1.11e-44 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme37424g00001 K01904 - gmx:100804044 177.948