Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme37401g00001 GAGGCGATCCTTTTGGATCTTCTTAGAGTTGTGAGTCATCATCGAGCCCGGTTAGCCACTCCCATCCGCACTGTTCAGAAAGTATACAGTGAGCCTGCCTCGGAAAATATTCCCTTTGGGGATAGCATTTTCACTCGATCTAGAGCAGCAGTAAATCGCCCATTCCTACTGATAGAACCACCATATAAAGTCAACGGTGAAGATAAAGTTAAGCCATCAACTCGTTCAACTCGTGCAAATGAGGAAAAAGATGCCAAGATTGTTGAAACTGCAG 274 0.4489 EAILLDLLRVVSHHRARLATPIRTVQKVYSEPASENIPFGDSIFTRSRAAVNRPFLLIEPPYKVNGEDKVKPSTRSTRANEEKDAKIVETA 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme37401g00001 91 Coils Coil 88 91 - -
Trme37401g00001 91 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 1 87 IPR045042 -
Trme37401g00001 91 MobiDBLite consensus disorder prediction 66 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme37401g00001 Trme-Chr37401 1 274 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme37401g00001 1 86 Mechanosensitive Ion Channel Family AT5G10490 56.977 3.90e-28 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme37401g00001 K22047 - gmx:100777815 158.303