Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme37390g00001 ATGGCTACCATAGTTCAATATGCATTGGCCTTGTTTTGTCTCTTGGTGTTGATGCAAAAGGGTGATGCCTATGAATTTGTAGTTGGAGGCCAAAATGGTTGGAGTGTTCCAAGTGACCCTAATGCCAACCCTTACAATCAATGGGCAGAAAAGAGCAGATTTCAAGTAGGAGACTCCCTAG 181 0.4365 MATIVQYALALFCLLVLMQKGDAYEFVVGGQNGWSVPSDPNANPYNQWAEKSRFQVGDSL 60
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme37390g00001 60 ProSiteProfiles Phytocyanin domain profile. 24 60 IPR003245 GO:0009055
Trme37390g00001 60 Gene3D - 22 60 IPR008972 -
Trme37390g00001 60 SUPERFAMILY Cupredoxins 23 60 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme37390g00001 Trme-Chr37390 361 541 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme37390g00001 1 60 Phytocyanin Superfamily AT3G20570 45.000 4.60e-14 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme37390g00001 - - gmx:100788637 102.834