Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme37375g00001 TATGGAGCAGACATTGCACGAGGGGTTGTTGAGCTTCACGCTGCAGGCGTTGTTTGTATGAATTTAAAGCCTTCCAATCTACTTCTTGATGCAAATGGTCATGCTGTGGTTTCTGATTATGGACTTGCTACAATTCTGAAGAAGCCTTCCTGTTGGAAGGCTCGACCTGAGTGTGACTCCACAAAGATCCATTCCTGTATGGAATGTATAATGCTTAGCCCACATTATACAGCACCAGAGGCTTGGGAACCTGTGAAGAAGTCATTAAATTTGTTCTGGGATGATGGAATAGGTATATCTCCCGAATCAGATGCCTGGAGTTTTGGTTGTACATTGGTGGAGATGTGCACGGGTGCCATTCC 362 0.4503 YGADIARGVVELHAAGVVCMNLKPSNLLLDANGHAVVSDYGLATILKKPSCWKARPECDSTKIHSCMECIMLSPHYTAPEAWEPVKKSLNLFWDDGIGISPESDAWSFGCTLVEMCTGAIP 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme37375g00001 121 Pfam Protein kinase domain 3 121 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme37375g00001 121 SUPERFAMILY Protein kinase-like (PK-like) 2 121 IPR011009 -
Trme37375g00001 121 Gene3D Transferase(Phosphotransferase) domain 1 1 121 - -
Trme37375g00001 121 PANTHER E3 UBIQUITIN-PROTEIN LIGASE KEG 1 121 IPR044584 GO:0004842|GO:0006952|GO:0009738|GO:0016567
Trme37375g00001 121 ProSiteProfiles Protein kinase domain profile. 1 121 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme37375g00001 Trme-Chr37375 665 1026 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme37375g00001 1 121 MAP Kinase Kinase Kinase AT4G08500 36.364 3.26e-14 65.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-1 Trme37375g00001 Pkinase 3.1e-16 CL0016