Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme37347g00001 ATGGGGTCCAAATCACTCGTCCTCCTCCCTCTCACAAGCAGGGAAGTTGGTAATGATGGTAAAGATATAATTTCTAATCTACGCAGTGGAGCTGCTGTTGAAAATGCTGTTGCTATTATGCAAGAGAAGGGATTATCTAATCCTAGAAGAAATAGGCATCGTTTAACGCCTGGAACTGTTAAATATGCTGCATTTCATGTCCTGTCTCTGGAAGGAAGCAAAGGCCTCAATATACTGGAAGTTGCAGACAAGATTCAGAAATCTGGACTTCGTGATCTTACAATAAGCAAAAATCCAGAGGCTTCTATAGCTTCTGCTTTATCTAGGGATTCAGAACTATTTGAAAAGACAGCTCCTTCAACATATTGTGTACGTCCTGCATATAGAAAGGACCCAGCTGATTCTGAAGCAATTTATTCAGCTGCCAGGGAAAGAATCAGGATATTCAAAAGTGGATTTGTGGGTGCAGAAGAAGCTAATGATGGTGAAAGGGATGAAGATTGTGAAAGCGATATGGCAAAAGATCCTGAAATTGATGATTTAGGAGCTCAACCAAATACGAAAAAGGAGGTCTCAAATTATGAGGAATTTAATGCAAACACTGTCGTGAGAAGTGGAAAGGACAATGGTGAGGTTTTGCAAACTCCTGAAAGTTGCCATGAGAAAGTGGATGAGGGTTTAAGATCAACTGTTGATGAAG 700 0.4043 MGSKSLVLLPLTSREVGNDGKDIISNLRSGAAVENAVAIMQEKGLSNPRRNRHRLTPGTVKYAAFHVLSLEGSKGLNILEVADKIQKSGLRDLTISKNPEASIASALSRDSELFEKTAPSTYCVRPAYRKDPADSEAIYSAARERIRIFKSGFVGAEEANDGERDEDCESDMAKDPEIDDLGAQPNTKKEVSNYEEFNANTVVRSGKDNGEVLQTPESCHEKVDEGLRSTVDE 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme37347g00001 233 MobiDBLite consensus disorder prediction 167 184 - -
Trme37347g00001 233 Pfam HB1, ASXL, restriction endonuclease HTH domain 58 125 IPR007759 GO:0006355
Trme37347g00001 233 MobiDBLite consensus disorder prediction 214 233 - -
Trme37347g00001 233 ProSiteProfiles HARE-type HTH domain profile. 58 127 IPR007759 GO:0006355
Trme37347g00001 233 MobiDBLite consensus disorder prediction 186 212 - -
Trme37347g00001 233 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 14 224 IPR044977 GO:0006357
Trme37347g00001 233 MobiDBLite consensus disorder prediction 158 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme37347g00001 Trme-Chr37347 60 1055 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme37347g00001 17 193 Homeobox Transcription Factor Family AT5G44180 67.232 6.15e-75 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme37347g00001 - - gmx:100797480 335.495