Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme373172g00001 ACTGTGGAAGAGAGGAACCTCCTCTCAGTTGGATATAAAAATGTCATTGGTGCACGAAGAGCCTCATGGCGCATTATGTCATCAATTGAGCAGAAGGAAGAGTCCAAGGGTAATGAGCACAATGTTAAACTGATCAAGAGTTACTGCCAAAAGGTTGAGGAGGAACTCTCCAAAATCTGCGGTGACATTCTGACTATTATAGACCAGCATTTGGTTCCTTCTTCCACCTCAGCCGAAGCTAATGTTTTCTACCATAAGATGTGA 264 0.4318 TVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKGNEHNVKLIKSYCQKVEEELSKICGDILTIIDQHLVPSSTSAEANVFYHKM 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme373172g00001 87 ProSitePatterns 14-3-3 proteins signature 1. 5 15 IPR023409 -
Trme373172g00001 87 PANTHER 14-3-3 PROTEIN 1 87 IPR000308 -
Trme373172g00001 87 PRINTS 14-3-3 protein zeta signature 48 72 IPR000308 -
Trme373172g00001 87 PRINTS 14-3-3 protein zeta signature 79 87 IPR000308 -
Trme373172g00001 87 SMART 1433_4 1 87 IPR023410 -
Trme373172g00001 87 SUPERFAMILY 14-3-3 protein 1 87 IPR036815 -
Trme373172g00001 87 Gene3D - 1 87 IPR036815 -
Trme373172g00001 87 Pfam 14-3-3 protein 1 87 IPR023410 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme373172g00001 Trme-Chr373172 3 266 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme373172g00001 1 87 14-3-3 family AT1G26480 83.908 9.92e-49 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme373172g00001 - K06630 gmx:100529130 168.703