Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme372977g00001 ATGGGTGGTGCCGTTCCAGAAAACCTAAACAGAGAACAGTATGTCTACCTAGCAAAACTAGCAGAACAAGCCGAACGCTACGAAGAGATGGTTTCCTTCATGCAGAAGCTAGTCGTAGCTTCCACACCATCTTCCGAACTTAGCGTCGAAGAGAGGAACCTAATTTCCGTCGCTTACAAAAACGTCATCGGATCACTCCGTGCTGCTTGGAGAATCGTTTCATCGATTGAACAGAAAGAAGAAAGTCGTAAGAATGAAGATCA 263 0.4525 MGGAVPENLNREQYVYLAKLAEQAERYEEMVSFMQKLVVASTPSSELSVEERNLISVAYKNVIGSLRAAWRIVSSIEQKEESRKNED 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme372977g00001 87 Gene3D - 4 87 IPR036815 -
Trme372977g00001 87 Pfam 14-3-3 protein 17 84 IPR023410 -
Trme372977g00001 87 PANTHER 14-3-3 PROTEIN 11 87 IPR000308 -
Trme372977g00001 87 Coils Coil 17 37 - -
Trme372977g00001 87 SUPERFAMILY 14-3-3 protein 10 85 IPR036815 -
Trme372977g00001 87 ProSitePatterns 14-3-3 proteins signature 1. 52 62 IPR023409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme372977g00001 Trme-Chr372977 53 315 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme372977g00001 8 87 14-3-3 family AT5G65430 81.250 2.16e-42 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme372977g00001 K06630 - csv:101222827 153.68