Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme37262g00001 ATGCTCTCAGTTTCTTTTCCCACACCTTTCAGCACCGCCGTCAATTTTGCCGGCAAAACCATCTCATCACAGCCGTGCCACGTCAGATCCCGGCGAGTTCTCATTTCTGCCACAGCCACCGCCACTGAAGCTACCTCTACTAAGCTTCCTCACGCCATGGTTTCATCTTCATGCACGTCGCTTTATGAGATTCTTGGAATTGCGACCGTTGCTTCTGATCAGGAGATTAAGGCAGCGTACCGGCGACTCGCGAGAGTTTCACATCCTGACGTGGCGGCGGTTGATCGGAAGGATTCGTCGGCGGATGAGTTCATGAAGATTCGTGATGCGTATTCCACGCTGTCAGATCCTGAGAAGCGAGCTAGCTATGATAGAAGTTTGTTCCGGCGTCAGCAACCGCTTACGGCGATCAGATTTTCTGGACACCGTTGTCGGAACTGGGAAACGGATCAGTGCTGGTAG 462 0.526 MLSVSFPTPFSTAVNFAGKTISSQPCHVRSRRVLISATATATEATSTKLPHAMVSSSCTSLYEILGIATVASDQEIKAAYRRLARVSHPDVAAVDRKDSSADEFMKIRDAYSTLSDPEKRASYDRSLFRRQQPLTAIRFSGHRCRNWETDQCW 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme37262g00001 153 ProSiteProfiles dnaJ domain profile. 60 127 IPR001623 -
Trme37262g00001 153 CDD DnaJ 62 116 IPR001623 -
Trme37262g00001 153 Gene3D DnaJ domain 48 142 IPR036869 -
Trme37262g00001 153 SMART dnaj_3 59 119 IPR001623 -
Trme37262g00001 153 PRINTS DnaJ domain signature 99 119 IPR001623 -
Trme37262g00001 153 PRINTS DnaJ domain signature 80 95 IPR001623 -
Trme37262g00001 153 PRINTS DnaJ domain signature 62 80 IPR001623 -
Trme37262g00001 153 SUPERFAMILY Chaperone J-domain 55 130 IPR036869 -
Trme37262g00001 153 PANTHER CHAPERONE PROTEIN DNAJ 11, CHLOROPLASTIC-LIKE 19 153 - -
Trme37262g00001 153 ProSitePatterns Nt-dnaJ domain signature. 104 123 IPR018253 -
Trme37262g00001 153 Pfam DnaJ domain 61 124 IPR001623 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme37262g00001 62 124 C2H2 Transcription Factor Family AT1G74250 43.284 1.24e-09 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme37262g00001 - - cam:101494220 214.542