Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme37177g00001 ATGGAAGATCAACAACAAAAGCAACATGTTCAGTGTCAAAGTTCCAATGCAAATAATCCAAACAATATTGAAAAGAGTGAAACTGTGAGATCAAGATGGACACCAAAACCTGAACAAATCCTTATACTTGAATCCATTTTCAACAGTGGAATGGTTAATCCACCAAAAGATGAAACCATTAGAATAAGAAAACTTCTTGAGAAATTTGGTGCTGTTGGTGATGCTAATGTTTTTTATTGGTTTCAAAATCGCCGATCTCGTTCTCGTCGCCGTCAAAGGCAGATGCAAGCCGCCGCTCAACTAAGCGGTGGCAGTGCAAATCCATATCACCAATACCACTGCAGCACCAATAGTGCTAACAGTCTGTCTCTTGGTGCTGCAATTGGTTTTGGTGGTTCCTCTAATTTCACTTTGAATTCTTCTTCTTGTAATTCATCTTATAATAATAACTTTTCTGGTTCTTCTTCATCATGTGGTCTTGGAGTTGGTCTCGGCGTCGGTGTTGGTGGTGGCGGAGAAGAAGGGTTTGGTG 532 0.406 MEDQQQKQHVQCQSSNANNPNNIEKSETVRSRWTPKPEQILILESIFNSGMVNPPKDETIRIRKLLEKFGAVGDANVFYWFQNRRSRSRRRQRQMQAAAQLSGGSANPYHQYHCSTNSANSLSLGAAIGFGGSSNFTLNSSSCNSSYNNNFSGSSSSCGLGVGLGVGVGGGGEEGFG 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme37177g00001 177 SUPERFAMILY Homeodomain-like 24 98 IPR009057 -
Trme37177g00001 177 PANTHER WUSCHEL-RELATED HOMEOBOX 11 1 160 IPR044558 GO:0003700|GO:0048830
Trme37177g00001 177 MobiDBLite consensus disorder prediction 7 28 - -
Trme37177g00001 177 ProSiteProfiles 'Homeobox' domain profile. 26 91 IPR001356 GO:0003677
Trme37177g00001 177 Gene3D - 16 96 - -
Trme37177g00001 177 SMART HOX_1 28 95 IPR001356 GO:0003677
Trme37177g00001 177 MobiDBLite consensus disorder prediction 1 32 - -
Trme37177g00001 177 Pfam Homeodomain 30 90 IPR001356 GO:0003677
Trme37177g00001 177 FunFam WUSCHEL-related homeobox 11 30 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme37177g00001 Trme-Chr37177 429 960 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme37177g00001 26 139 Wox Gene Family AT5G17810 61.290 5.31e-38 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Trme37177g00001 Homeodomain 4.1e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme37177g00001 - - aprc:113866574 150.984