Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme37164g00001 ATGAGGTGTCAGCTCAGTGAGTATGGCTACACCATGAACATAACAGAGAAGRGTGATGTATACAGTTATGGAGTGGTTTTGCTAGAGATACTAAGCGGAAGAAGTGCCGTTGAATCTCAACATGTTGGAGACGGACAACACATAGTTGAATGGGTGAAGAAGAAAATGGCAAGCTTTGAACCAGCTGTATCAATACTAGATACAAAGCTTCAAAGTCTACCAGATCAAATGGTGCAAGAGATGCTTCAAACACTTGGAATTGCTATGTTTTGTGTGAATTCTTCGCCGGTTGAACGTCCAACTATGAAGGAAGTTGTTGCATTACTGATGGAAGTGAAGTGTCAGCCTCATGAGGAGATGGGGAAAACCTCTCAACCTTTAATCAAGCAGTCATCAACTCAATGCTGA 408 0.4191 MRCQLSEYGYTMNITEKXDVYSYGVVLLEILSGRSAVESQHVGDGQHIVEWVKKKMASFEPAVSILDTKLQSLPDQMVQEMLQTLGIAMFCVNSSPVERPTMKEVVALLMEVKCQPHEEMGKTSQPLIKQSSTQC 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme37164g00001 135 SUPERFAMILY Protein kinase-like (PK-like) 7 118 IPR011009 -
Trme37164g00001 135 Gene3D Transferase(Phosphotransferase) domain 1 4 132 - -
Trme37164g00001 135 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 7 113 - -
Trme37164g00001 135 Pfam Protein tyrosine and serine/threonine kinase 11 108 IPR001245 GO:0004672|GO:0006468
Trme37164g00001 135 ProSiteProfiles Protein kinase domain profile. 1 120 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme37164g00001 Trme-Chr37164 408 880 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme37164g00001 7 129 Receptor kinase-like Gene Family AT4G26540 42.276 6.10e-27 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Trme37164g00001 PK_Tyr_Ser-Thr 6.6e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme37164g00001 - - tpra:123903867 256.529