Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme37149g00001 TCAAAGAATCACATTCCTATTGTGGCTGGAATTGTGGGTGGTGCTGTATTTATTCTCATTTCAATCATTGTCGTATATCTCTTTAAAACCAACAAGGTAGCGACCGTTAAACCATGGGCTACAGGATTAAGTGGACAGCTTCAGAAGGCATTTGTGACAGGTGTGCCGAAGCTAAAGAGATCAGAACTTGTAGCGGCATGCGAAGATTTTAGTAATGTAATTGGTACTTCACCCATTGGTCAAGTGTTCAAAGGGACTCTATCCAGCGGTGTTGAAATAGCTGTGGCCTCTGTTACCACGACATCATTGAAAGATTGGTCAAAGACTTCAGAAGTCCAATTTCGTAAGAAGATAGATACATTATCAAAGATGAACCACAAGAATTTCGTAAATCTTATTGGATATTGCGAAGAAGACGAGCCTTTCACCAGAATGGTGGTTTTTGAATATGCCCCAAATGGAACACTCTTTGAGCATTTACACATAAAAGAAGCTGAGCATTTGGATTGGGGAACAAGACTCAGAGTTGCAATTGGCACGGCTTACTGCCTGCAACATATGCACCAGTTGGATCCTCCTTTCGCCCACAGCGACCTAAATTCTTCATCTGTCCAACTCACTGACGACTACGCTGCCAAAATCTCGGACTTGAGTTTCTTGAGCGAAATAACTTCAGATGATACAAAAGCTGCTGCTAAGAAACACAATGAGCCGACATTAGCAA 724 0.4199 SKNHIPIVAGIVGGAVFILISIIVVYLFKTNKVATVKPWATGLSGQLQKAFVTGVPKLKRSELVAACEDFSNVIGTSPIGQVFKGTLSSGVEIAVASVTTTSLKDWSKTSEVQFRKKIDTLSKMNHKNFVNLIGYCEEDEPFTRMVVFEYAPNGTLFEHLHIKEAEHLDWGTRLRVAIGTAYCLQHMHQLDPPFAHSDLNSSSVQLTDDYAAKISDLSFLSEITSDDTKAAAKKHNEPTLA 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme37149g00001 241 Gene3D Phosphorylase Kinase; domain 1 39 150 - -
Trme37149g00001 241 FunFam Inactive receptor-like serine/threonine-protein kinase 42 150 - -
Trme37149g00001 241 Pfam Protein tyrosine and serine/threonine kinase 71 236 IPR001245 GO:0004672|GO:0006468
Trme37149g00001 241 SUPERFAMILY Protein kinase-like (PK-like) 51 228 IPR011009 -
Trme37149g00001 241 ProSiteProfiles Protein kinase domain profile. 68 241 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme37149g00001 241 PANTHER PROTEIN MALE DISCOVERER 2 3 232 - -
Trme37149g00001 241 Gene3D Transferase(Phosphotransferase) domain 1 151 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme37149g00001 Trme-Chr37149 61 1078 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme37149g00001 54 219 Receptor kinase-like Gene Family AT3G19300 34.132 1.90e-28 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Trme37149g00001 PK_Tyr_Ser-Thr 2.2e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme37149g00001 - - psat:127084000 422.55