Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme3712g00002 ATGGAGCAGATACTGGGGATGTTAGAGAGAAAATTGATAGCCAAGTCAAAAAACTACAAGGACCCGGCTTGGCGTCATATTTTCATGCTAATTAATAGGTCGCACATAGAAGCTATAAATAAAAGTTTGGATTTGGAAACCATTTTCGGCAATGACTGGTTCCAAAATAACAAAGCGAAAATCCAACAAAACCTTGATCTTTATAAACGAAACTCGTGGAATGAAGTGTTGGAGTTTCTGAAGCTAGACAACAATGAGAAGTTGGCACTCAATGATAACATTACAGAAGAGGTATTGAAAGAGAAGATCCATTTGTTCAACAGTCACTTCGAAAAGATATCTAGAGTTCAGTCTACATGGTTTATTTATGAGACGAAGCCAAGGGAAGAAATAGTAACATATGTGGGAAACATCTTGCTGCCTGCATATGGAATCTTCATTGGGAGGCTCSAAGATATTCTTGGTAACCAAGCTTATAAGTACATTAAATATGGAATGTTTGAGATTCAAGATCAACTCAACCATTTATTTCTGGGAAACCAAAATATATGA 552 0.3623 MEQILGMLERKLIAKSKNYKDPAWRHIFMLINRSHIEAINKSLDLETIFGNDWFQNNKAKIQQNLDLYKRNSWNEVLEFLKLDNNEKLALNDNITEEVLKEKIHLFNSHFEKISRVQSTWFIYETKPREEIVTYVGNILLPAYGIFIGRLZDILGNQAYKYIKYGMFEIQDQLNHLFLGNQNI 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme3712g00002 183 Gene3D Exocyst complex component Exo70 1 183 - -
Trme3712g00002 183 PANTHER EXOCYST COMPLEX PROTEIN EXO70 2 178 IPR004140 GO:0000145|GO:0006887
Trme3712g00002 183 Pfam Exo70 exocyst complex subunit 2 174 IPR046364 GO:0000145|GO:0005546|GO:0006887
Trme3712g00002 183 SUPERFAMILY Cullin repeat-like 3 177 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme3712g00002 Trme-Chr3712 1689 2240 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme3712g00002 1 180 EXO70 exocyst subunit family AT5G58430 39.011 3.07e-32 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme3712g00002 - - mtr:112421859 270.011