Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme3712g00001 ATGGATTCGTTACTACAGCCTAGTAATGATTTTTCTAGAATGATGCGACAGTTTGCGTCATGTACTAATGCACTTCAACAGGAAAATTTGAATCTCATAGATAGGCTTATGGAGCTAGTGAAGGAATACAATCAAGATATGAGTGAATTACATTTACTTGGTAAGTGTGAATTCGTAATGGATACTCTTCCGTCAGGAAAGATGCATAATCTTCACGAAATTGTGAGGTTGATGGTAGCCGCCGGTTATGAGAAAGAGTGCTGTGATGTGTATAGCAGTTGGCGTGGGGTATTCTTGCAGGATTTTCTGATAAATAAAATATTTGGTTTACCGGAGGCAAAGAACAACACAGAGAATGAGCACGAAAGAGAGCAATATTTAAATACCATGTTTCAAAGATGGATAACTTCTTCCGATGTAGCTATGAAGATTTTGTTTCCCATTGAACAAAAACTCTGCAATCGTGTTTTCTCGGGATTCAGTTCTGCCGCTTCTCATTGTTTCATTGAGGTTTGCCAAAAAGCAATGTTTCAGCTGCTGGATTTTGCAGATGCAGTTGCTTCTGGGGTCCCTACAAAATGGCGTTTATTCAAAATGCTCGACATATTTGAGCAGTTGCGTAATCTAATTCCTAAATTACAATCTTTGTTCCCTGATTCAACATTACTGAACGAAGCAATTGCAATTCAAAATAGATTAGGAGAATCTAGCAGGGACCTTTTAANNNNNNNNNNTAATATTATATTTAGAGTCCCAAAACCAAAGCAAGGTGTTCCACCTTTTGGCCGTCTTCATCCAATGACTGCGGAGGTCATGAGCTACGTGTCTTCGGTACCCTAA 840 0.3845 MDSLLQPSNDFSRMMRQFASCTNALQQENLNLIDRLMELVKEYNQDMSELHLLGKCEFVMDTLPSGKMHNLHEIVRLMVAAGYEKECCDVYSSWRGVFLQDFLINKIFGLPEAKNNTENEHEREQYLNTMFQRWITSSDVAMKILFPIEQKLCNRVFSGFSSAASHCFIEVCQKAMFQLLDFADAVASGVPTKWRLFKMLDIFEQLRNLIPKLQSLFPDSTLLNEAIAIQNRLGESSRDLLXXXXNIIFRVPKPKQGVPPFGRLHPMTAEVMSYVSSVP 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme3712g00001 279 SUPERFAMILY Cullin repeat-like 29 277 IPR016159 -
Trme3712g00001 279 Gene3D Exocyst complex component Exo70 1 278 - -
Trme3712g00001 279 PANTHER EXOCYST COMPLEX PROTEIN EXO70 25 277 IPR004140 GO:0000145|GO:0006887
Trme3712g00001 279 Coils Coil 22 53 - -
Trme3712g00001 279 Pfam Exo70 exocyst complex subunit 132 276 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme3712g00001 Trme-Chr3712 806 1645 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme3712g00001 57 278 EXO70 exocyst subunit family AT5G58430 43.363 3.59e-53 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme3712g00001 K07195 - mtr:11426486 244.973