Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme371198g00001 ATGGGTGTATTGATTCCTAGGAACACTACTATACCTGTCAAGAAGACAGAACAATATATTACAGTTGAGGATAACCAACCTTCTGTCATAATCAAGGTTTATGAGGGAGAGAGAACTAGAGCCAGTGACAACAATCTGCTTGGTTCTTTTCGTCTCTCTGGGTTGCCACCCGCACCTCGTGGCCATCCTATTGAG 195 0.441 MGVLIPRNTTIPVKKTEQYITVEDNQPSVIIKVYEGERTRASDNNLLGSFRLSGLPPAPRGHPIE 65
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme371198g00001 65 Pfam Hsp70 protein 2 63 IPR013126 GO:0005524|GO:0140662
Trme371198g00001 65 PANTHER HEAT SHOCK PROTEIN 70KDA 1 63 IPR013126 GO:0005524|GO:0140662
Trme371198g00001 65 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 1 65 IPR029047 -
Trme371198g00001 65 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 2 63 IPR029047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme371198g00001 Trme-Chr371198 31 225 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme371198g00001 1 63 Calmodulin-binding Proteins AT3G12580 69.841 1.16e-25 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme371198g00001 K03283 - gmx:102667578 107.457