Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme37116g00001 ACTGGAAAATCTCAGTTTCTGAAATTTGCTGCAAAATTGAGCAACCGGTCTGTTATTACAACTGGGTTGGGAAGCACAAGTGCAGGATTGACTGTTACTGCCGTGAAGGATGGGGGTGAGTGGATGTTGGAAGCTGGCGCCCTTGTCTTGGCAGATGGAGGATTGTGTTGCATAGATGAATTTGATAGGTAA 192 0.4583 TGKSQFLKFAAKLSNRSVITTGLGSTSAGLTVTAVKDGGEWMLEAGALVLADGGLCCIDEFDR 63
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme37116g00001 63 Pfam MCM P-loop domain 1 63 IPR001208 GO:0003677|GO:0005524|GO:0032508
Trme37116g00001 63 ProSiteProfiles MCM family domain profile. 1 63 IPR001208 GO:0003677|GO:0005524|GO:0032508
Trme37116g00001 63 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 1 62 IPR031327 GO:0003677|GO:0005524|GO:0032508
Trme37116g00001 63 Gene3D - 1 63 IPR027417 -
Trme37116g00001 63 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 63 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme37116g00001 Trme-Chr37116 337 1070 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme37116g00001 1 62 Core DNA Replication Machinery Family AT2G14050 98.387 6.60e-38 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme37116g00001 K10738 - csin:114276324 124.02