Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme37103g00001 ACAACTGTCAAACAAATCGAGGACGCATTCAAAGAATTCACATCACGGGATGATATCGCAATTGTGCTGATTAGCCAATTTGTTGCAAATATGATAAGGTTTTTGGTTGATAGTTATAACAAGCCTGTTCCTGCAATTCTTGAAATCCCTTCAAAAGATCACCCTTATGATCCTGCTCATGATTCTGTTCTTTCTCGGGTTAAGTATCTCTTCAATACTGAATCAGTGGCAGGTGATAGACGCTGA 246 0.3902 TTVKQIEDAFKEFTSRDDIAIVLISQFVANMIRFLVDSYNKPVPAILEIPSKDHPYDPAHDSVLSRVKYLFNTESVAGDRR 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme37103g00001 81 Gene3D ATPase, V1 complex, subunit F 1 73 IPR036906 GO:0034220
Trme37103g00001 81 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT F 1 77 - -
Trme37103g00001 81 SUPERFAMILY AtpF-like 3 68 IPR036906 GO:0034220
Trme37103g00001 81 NCBIfam V-type ATPase subunit F 1 75 IPR005772 GO:0033180|GO:0046961|GO:1902600
Trme37103g00001 81 Pfam ATP synthase (F/14-kDa) subunit 2 67 IPR008218 GO:0034220|GO:0046961
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme37103g00001 1 77 Primary Pumps ATPases(2) AT4G02620 87.013 7.63e-48 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme37103g00001 K02151 - han:110930638 158.303