Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme37097g00001 AAAGCAGATGTTTATAGTTTTGGAGTTGTTGCCTTGGAAATAGTTAGTGGGAAGCACAACACCATGAACCAGCCAAAGGATGAATGCTTCTCTCTTGTTGATTGGGTGCATATCTTGAAGGAAAAAGGTAACATAATGGAACTAGTTGATGAGAGGTTAGGTGAAGATTTCAAAAAAGAGGAAGCAATGATAATGATCAATGTGGCACTTTTATGCACTAATGTTTCTCCAATGCACAGACCAACAATGTCATCAGTGGTAAGCATGCTTGAAGGAAAATCTGTTGTTCAAGAAGTTGTTTTTGACACAAGCCAAGTTTTTGAAGGAAAAAAGTTAGAGATGATTCAACAAAATGAAAAAAATGATACATCTGAAATTGAGACTGAAGAAGAGAGTATCTTAATAGATTCAACTGCAGAATATATGTCTGATGCAAATCTACATTCTACCAACATGGATTCTCCTTATACAAGTTTCAACACTTTGTAA 489 0.3517 KADVYSFGVVALEIVSGKHNTMNQPKDECFSLVDWVHILKEKGNIMELVDERLGEDFKKEEAMIMINVALLCTNVSPMHRPTMSSVVSMLEGKSVVQEVVFDTSQVFEGKKLEMIQQNEKNDTSEIETEEESILIDSTAEYMSDANLHSTNMDSPYTSFNTL 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme37097g00001 162 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 1 118 - -
Trme37097g00001 162 SUPERFAMILY Protein kinase-like (PK-like) 1 97 IPR011009 -
Trme37097g00001 162 Gene3D Transferase(Phosphotransferase) domain 1 1 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme37097g00001 Trme-Chr37097 1 933 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme37097g00001 1 137 Receptor kinase-like Gene Family AT1G07650 49.315 3.28e-38 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Trme37097g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme37097g00001 - - psat:127081874 267.314