Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme3698g00001 ATGTTGTCTCTAATGAAACTTCCACAAATCTATGCCATAGATACAACAAGAGGGATGGAGCAATGCATCTTGAACTTCTTCAGGGCTCTGTATCTCCCCCCTGATAAGGAGCCATTAGATTGGAACACTAGAATGAAAATAGCTGCTGGTGCTGCAAAAGGATTGGAATACCTACATGACAAGGCCAATCCTCCAGTAATTTATAGGGACTTCAAGTCATCTAATATATTACTTGATGAAGGTTATCACCCAAAGCTTTCTGACTTTGGTCTGGCGAAGCTTGGTCCTGTTGGGGACAAATCACATGTTTCCACTCGTGTCATGGGAACTTATGGTTACTGTGCTCCTGAGTATGCTATGACTGGACAACTGACTGTAAAATCTGATGTATATAGTTTTGGGGTAGTCTTCTTGGAGCTGATTACTGGCCGTAAAGCCATTGACAGCACCCGGCCCCACGGAGAACAAAACCTTGTTACATGGGCACGGCCTTTGTTCAATGACCGTAGGAAGTTTCCAAAGTTGGCAGATCCACGATTGCAGGGTCGGTACCCCATGCGGGGTCTTTATCAAGCTCTAGCTGTGGCATCAATGTGCATTCAAGAACAGGCAGCTGCACGTCCTCTGATTGGGGATGTGGTAACGGCCCTCTCTTATCTAGCCAACCAGGCACATGACACTAACAATGCCGGCATTGGTAATAATAAGGGAACTGGTGATGATAAAAGGAGTAGAGATGATAAAGGTGGAAGAATATTACAAAATGATGAAGGTGGAGGATCTGGACGCAGATGGGATTTGGAAGGATCTGAGAAAGATGACTCCCCACGTGAAACTGCGAGGATGTTAAACAGGGATCTTGATAGAGAACGTGCTGTGGCTGAAGCCAAGATGTGGGGAGAGAACTGGAGAGAGAAAAGACGGCAGAGTGTGCAGGGCAGTTTTGATGCTTCTAATGCTTAG 963 0.4579 MLSLMKLPQIYAIDTTRGMEQCILNFFRALYLPPDKEPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLDEGYHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSTRPHGEQNLVTWARPLFNDRRKFPKLADPRLQGRYPMRGLYQALAVASMCIQEQAAARPLIGDVVTALSYLANQAHDTNNAGIGNNKGTGDDKRSRDDKGGRILQNDEGGGSGRRWDLEGSEKDDSPRETARMLNRDLDRERAVAEAKMWGENWREKRRQSVQGSFDASNA 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme3698g00001 320 Pfam Protein kinase domain 39 151 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme3698g00001 320 SUPERFAMILY Protein kinase-like (PK-like) 36 217 IPR011009 -
Trme3698g00001 320 ProSiteProfiles Protein kinase domain profile. 1 220 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme3698g00001 320 MobiDBLite consensus disorder prediction 238 253 - -
Trme3698g00001 320 Gene3D Transferase(Phosphotransferase) domain 1 29 241 - -
Trme3698g00001 320 MobiDBLite consensus disorder prediction 261 286 - -
Trme3698g00001 320 ProSitePatterns Serine/Threonine protein kinases active-site signature. 66 78 IPR008271 GO:0004672|GO:0006468
Trme3698g00001 320 MobiDBLite consensus disorder prediction 226 286 - -
Trme3698g00001 320 FunFam Serine/threonine-protein kinase PBS1 23 235 - -
Trme3698g00001 320 PANTHER OS07G0668900 PROTEIN 30 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme3698g00001 Trme-Chr3698 494 1875 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme3698g00001 30 308 Glycoside Hydrolase AT3G07070 56.272 2.75e-100 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Trme3698g00001 Pkinase 3e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme3698g00001 K13430 - pvy:116140735 534.258