Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme36976g00001 GGTTTGAGGAAAATTTTGGGTATTGTCTATCCTGAAGTCTCAGTAATTCCTAAAAGAAGCCGTCAGCTGTTTTGGAGAGCTGCCGTTGAGATGAGTAGGAATGCATCACAGCTCGCACTTCAGGTCCGATATCTAGATTTTCATATCAGATGGATTGATCTGATTCGGCCGGAGTATAACCTCCTGGATGGAAAAGGTCAAGATACTGAAGTTTCTGCTTTTAGAAATGCAATTATTCGTGACAAAAAGTTTGCACAGGGCAAAACATCCTATGGTATAGATTTTGGGAGCCAAAAGCATATTCCTTCTCGGATAATGAAGAATGCTGAAACAATAGACGAAGGGCCAGATGGAAAGAAGTATTGGTTTTCTGAAACATGCATTCCTTTATATTTGGTAAAAGAGTATGAAGTAAGAAACAGAAAAGAGCCATCTCATAAAGATAACTTGAATGTTGCATCTCGATGGCGCAAAAGGCGGTTGAATGCTATCTGCAAGGACATATTTTTTTACCTCACTTGCAAGAGAGACAAAACAGACATGTTATCATGTTCTGAATGCTCTCAAGTGTAG 573 0.3944 GLRKILGIVYPEVSVIPKRSRQLFWRAAVEMSRNASQLALQVRYLDFHIRWIDLIRPEYNLLDGKGQDTEVSAFRNAIIRDKKFAQGKTSYGIDFGSQKHIPSRIMKNAETIDEGPDGKKYWFSETCIPLYLVKEYEVRNRKEPSHKDNLNVASRWRKRRLNAICKDIFFYLTCKRDKTDMLSCSECSQV 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme36976g00001 190 PANTHER PHD FINGER FAMILY PROTEIN 1 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme36976g00001 Trme-Chr36976 218 1019 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme36976g00001 1 187 PHD Transcription Factor Family AT5G35210 48.168 4.40e-51 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme36976g00001 - - mtr:25487492 311.227