Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme36952g00001 ATGAATGCTCCAACGAAGAAAAAAATTCAGAAAAAATGCAAAATTAGAGGCTACAATATCAAAGTCGAAGCTCTCGACGAGATTCTTTCCTTCGTTACTCGCTTTGAACCCGCCGAACAAGACGAAGCCATCGATCTCGTCCTCGATCAGCTAGAAAACGAATCTCTGAAATCTACTATAATCGATGTGGAGCCGGTGCAACGAGTGGTGAATTTGTTACTGGAAGCCGATGCAAAGGAGGAAACTACTGATAACTTCGCTTCCTCTTCTTCTTCCGCCATTGCTGTGATTAATGTGTTCGACGTTCCTAGATATAAATATGATGCTATCAGAAGGAATTTCTACCAGTAG 351 0.4188 MNAPTKKKIQKKCKIRGYNIKVEALDEILSFVTRFEPAEQDEAIDLVLDQLENESLKSTIIDVEPVQRVVNLLLEADAKEETTDNFASSSSSAIAVINVFDVPRYKYDAIRRNFYQ 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme36952g00001 116 Gene3D - 2 73 - -
Trme36952g00001 116 Pfam DNA polymerases epsilon N terminal 3 71 IPR024639 -
Trme36952g00001 116 PANTHER DNA POLYMERASE EPSILON SUBUNIT B 2 116 IPR016266 GO:0003677|GO:0006261|GO:0008622
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme36952g00001 16 114 Core DNA Replication Machinery Family AT5G22110 45.000 1.17e-19 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme36952g00001 K02325 - vvo:131647712 154.451