Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme36848g00001 CCTGGAGGTCCTCTGCTAAATCCTCTTGGCCTAGCTAAAGACATTAAAAATGCACATGACTGGAAGCTTAAAGAGATCAAGAATGGGCGACTTGCAATGGTGGCAATACTTGGCATCTTTGTACAAGCTTCAGTGACTCATGTTGGACCAATTGATAACCTTGTTGAGCATCTCTCAAATCCATGGCATAAAACTATTATTCAGACCCTTGCAAGTTCTAGTTCTTAG 228 0.4167 PGGPLLNPLGLAKDIKNAHDWKLKEIKNGRLAMVAILGIFVQASVTHVGPIDNLVEHLSNPWHKTIIQTLASSSS 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme36848g00001 75 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 70 IPR001344 GO:0009765|GO:0016020
Trme36848g00001 75 SUPERFAMILY Chlorophyll a-b binding protein 1 72 - -
Trme36848g00001 75 Gene3D Chlorophyll a/b binding protein domain 1 75 - -
Trme36848g00001 75 Pfam Chlorophyll A-B binding protein 1 43 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme36848g00001 Trme-Chr36848 1 316 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme36848g00001 1 70 Chloroplast and Mitochondria Gene Families AT1G61520 55.714 2.03e-23 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme36848g00001 K08911 - gmx:100804934 145.591