Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme367336g00001 TGGGTTGAAGCTGAGAGTTTCAAGCCTAACCGGTTTCTTAATAGTTCAATTGACTTCAAAGGTGCTGACTTTGAATACATACCGTTTGGTGCTGGAAGGAGGATGTGTCCAGGCGTTACATTTGGCTTATCCAACATTGAGTTGCTTCTTGCTCAATTACTTTATCACTTTGATTGGAAGCTTCCCAATGGAGTTGAGAATGAAGAACTTGATATGACCGAGTCATTTGGAATTACAGTGAGTAGAAAAAATGACCTACTCTTAATTCCGATTAATCGTCGTATTAGATAA 291 0.3883 WVEAESFKPNRFLNSSIDFKGADFEYIPFGAGRRMCPGVTFGLSNIELLLAQLLYHFDWKLPNGVENEELDMTESFGITVSRKNDLLLIPINRRIR 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme367336g00001 96 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 29 38 IPR017972 GO:0005506|GO:0016705
Trme367336g00001 96 Gene3D Cytochrome P450 1 95 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme367336g00001 96 SUPERFAMILY Cytochrome P450 1 93 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme367336g00001 96 Pfam Cytochrome P450 1 82 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme367336g00001 96 PANTHER OS08G0105600 PROTEIN 1 93 - -
Trme367336g00001 96 PRINTS E-class P450 group IV signature 36 54 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme367336g00001 96 PRINTS E-class P450 group IV signature 20 36 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme367336g00001 Trme-Chr367336 3 293 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme367336g00001 1 94 Cytochrome P450 AT1G33720 53.191 2.13e-34 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme367336g00001 - - mtr:11442302 164.081