Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme3665g00001 ATGTTTGGATTAGCGGTGAATTTGGTAGAATCAGTGTGTCGCCACGGCCACTCACTCAAAGGACGTGGGAAGAAACAACCTCCATGGCGGGTKTTTTCTTTGAAGGAGTTACACTCAGCTACAAATAATTTCAACTATGATAACAAGCTTGGCGAAGGGGGATTCGGAAGTGTTTACTGGGGCCAGCTTTGGGATGGATCACAAATTGCAGTGAAAAGATTGAAGGTTTGGAGCAACAAAGCAGACATGGAATTTGCTGTTGAAGTTGAGATATTGGCAAGAGTACGRCACAAGAATCTTCTTAGTCTACGTGGCTATTGTGCTGAAGGCCAGGAACGTCTAATTGTATATGACTATATGCCGAATTTGAGCCTACTCTCTCATCTTCACGGACAGCACTCAACAGAAAGCCTCCTTGATTGGAATCGACGGATGAATATTGCAATCGGGTCTGCTGAGGGAATTTTGTATCTTCATGTCCAAGCAACACCGCATATCATCCATAGGGATGTTAAAGCAAGCAATGTGTTACTGGATTCAGATTTCCAAGCACGTGTTGCTGATTTTGGTTTTGCCAA 578 0.436 MFGLAVNLVESVCRHGHSLKGRGKKQPPWRVFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKADMEFAVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNLSLLSHLHGQHSTESLLDWNRRMNIAIGSAEGILYLHVQATPHIIHRDVKASNVLLDSDFQARVADFGFA 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme3665g00001 192 ProSitePatterns Serine/Threonine protein kinases active-site signature. 166 178 IPR008271 GO:0004672|GO:0006468
Trme3665g00001 192 SUPERFAMILY Protein kinase-like (PK-like) 26 192 IPR011009 -
Trme3665g00001 192 Gene3D Transferase(Phosphotransferase) domain 1 120 192 - -
Trme3665g00001 192 ProSiteProfiles Protein kinase domain profile. 44 192 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme3665g00001 192 SMART serkin_6 44 192 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme3665g00001 192 FunFam Os07g0541700 protein 120 192 - -
Trme3665g00001 192 Gene3D Phosphorylase Kinase; domain 1 9 119 - -
Trme3665g00001 192 Pfam Protein kinase domain 45 192 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme3665g00001 192 PANTHER OS01G0253100 PROTEIN 25 192 - -
Trme3665g00001 192 FunFam PTI1-like tyrosine-protein kinase At3g15890 16 119 - -
Trme3665g00001 192 ProSitePatterns Protein kinases ATP-binding region signature. 50 72 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme3665g00001 Trme-Chr3665 8 2196 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme3665g00001 32 192 Trihelix Transcription Factor Family AT1G70460 54.037 1.35e-54 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Trme3665g00001 Pkinase 5.9e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme3665g00001 - - gmx:100788153 346.665