Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme36655g00001 ATGGGCACAGTTACAGGTGTCAGTGATCTGGATCCCGTGAACTGGAAAAACTCTCAGTGGCGTAATTTGCAGGTTGGTTGGGATGAATCCACTGCTGGAGAAAGGCGAAGTAGGGTCTCAATATGGGAAATCGAACCTGTTACTGCTCCATTTTTCATCTGTCCGCCTCCATTCATCAGATCCAAGAGACCAAGACTACCTGGAATGCCAGATGACGAGCTATTTAATGTCAGTAACCTTTTCAAAAGTACAATGCCTTGGCTCGGTGATGATATGAGTATGAAGGATCCTCAGGCTTTCCCTGGCATGAGCTTAGCTCAATGGATGAACTTACAGCAAAATCCCACTCTGGCTAGCTCATTGCAACAAAATCATGTGCCTTCCATGTCTGGATCCGTTCTACACAATCTTCCTGGAGCTGATATTGCGCATCAATTGGGATTCTCAACTCAACAAATCTCTCAACCAAACAA 473 0.4524 MGTVTGVSDLDPVNWKNSQWRNLQVGWDESTAGERRSRVSIWEIEPVTAPFFICPPPFIRSKRPRLPGMPDDELFNVSNLFKSTMPWLGDDMSMKDPQAFPGMSLAQWMNLQQNPTLASSLQQNHVPSMSGSVLHNLPGADIAHQLGFSTQQISQPN 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme36655g00001 157 Gene3D - 1 50 - -
Trme36655g00001 157 FunFam Auxin response factor 1 50 - -
Trme36655g00001 157 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 1 122 IPR044835 GO:0003677|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme36655g00001 Trme-Chr36655 1 719 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme36655g00001 1 157 B3 DNA Binding Superfamily AT1G19220 59.375 8.26e-56 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme36655g00001 - - gmx:100817780 276.559