Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme366371g00001 GCTGCAAGAGGGCTTGAATACTTGCACGAGAAGGCTGATCCCCATATTATCCACCGGGACATCAAGTCAAGCAATGTGCTAATCTTTGATGATGATGTTGCAAAAATTGCTGATTTTGATTTGTCAAATCAAGCTCCAGACATGGCTGCACGTCTTCATTCCACTCGTGTCCTTGGAACCTTTGGTTATCATGCACCTGAGTAA 204 0.4412 AARGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 67
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme366371g00001 67 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 1 67 - -
Trme366371g00001 67 ProSitePatterns Serine/Threonine protein kinases active-site signature. 16 28 IPR008271 GO:0004672|GO:0006468
Trme366371g00001 67 Pfam Protein kinase domain 2 67 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme366371g00001 67 SUPERFAMILY Protein kinase-like (PK-like) 2 67 IPR011009 -
Trme366371g00001 67 Gene3D Transferase(Phosphotransferase) domain 1 1 67 - -
Trme366371g00001 67 ProSiteProfiles Protein kinase domain profile. 1 67 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme366371g00001 Trme-Chr366371 98 301 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme366371g00001 1 67 Receptor kinase-like Gene Family AT4G02010 58.209 8.65e-21 82.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Trme366371g00001 Pkinase 2.5e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme366371g00001 K13436 - gmx:100817460 139.043