Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme36491g00001 CCTGTGCAGGCTGCAGTTGGTATTGCTGCTTGTGGTCTTAGACCTGAAATTCCCAAGGACTGCCAACCTAATCTAAGATACATTATGACAAAATGCTGGAACAACACCCCTTCCAAACGGCCTAAATTCTCCGATATTTTAGCCATATTGCTGCAACCGTACAACAACAATAGGTAA 177 0.435 PVQAAVGIAACGLRPEIPKDCQPNLRYIMTKCWNNTPSKRPKFSDILAILLQPYNNNR 58
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme36491g00001 58 Gene3D Transferase(Phosphotransferase) domain 1 1 58 - -
Trme36491g00001 58 Pfam Protein tyrosine and serine/threonine kinase 12 49 IPR001245 GO:0004672|GO:0006468
Trme36491g00001 58 SUPERFAMILY Protein kinase-like (PK-like) 6 50 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme36491g00001 Trme-Chr36491 2 178 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme36491g00001 1 52 MAP Kinase Kinase Kinase AT4G35780 48.077 2.27e-14 63.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-7 Trme36491g00001 PK_Tyr_Ser-Thr 5.7e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme36491g00001 - - pvu:PHAVU_008G258400g 112.464