Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme36432g00001 ATGGAAGTAACCGATTTTCAAGGGGATGATGAGTTCTACACTGAAGTTGAGATTATTAGCAACTTGAAGCACCGCAATCTAGTTCCGCTAAGAGGGTGTTGCGTGGTCGATGAGGATCATAATCAAGAACACAGAAATAGGTATCTTGTTTATGATTATATGCCGAACGGTAACCTCGAAGATCATCTGTTTCCATCCATGGAAAATGAAAAGAAATTGTTGACTTGGCCTCAAAGAAAAAACATAATCTTCGATGTGGCAAACGCGTTGGTTTATTTGCATTTTGGAGTTAAACCTGCTATTTATCACAGAGATATCAAAGCTACAAATATACTACTTGATGCAGATATGAGAGCAAGGGTTGCAGATTTTGGACTAGCTAAAGAAAGCAGTGAAAGTAGGTCTCAGCTAAATACTAGAGTAGCTGGAACTTATGGATATCTTGCACCAGAATATGCACTTTATGGTCAACTAACTGAGAAGAGTGATGTGTATAGTTTTGGTGTAGTGATTTTGGAGATTATGTGTGGAAGAAAAGCTCTTGAGTTATCTTCATCAGGAACACCTAAATTCTTGATCACTGATTGGGTTTGGTCATTGATGAAAACTGGAAACATAGCAGATGCTTTGGATGTTTCTATCAAATCCTCCAATAGTAGAAATATAATGGAGAGGTTTTTGTTGGTTGGAATTTTGTGTTCTCATGTTATAGGTGATTCAAGGCCAACAATTTTGGATGGTTTGAGGATGTTAGAAGGAGACATTGAGGTTCCATCAATTCCAGATAGGCCAATGACTCTTGAGCACCATATCAATATGTTTACTAATGCCAATTCAGTAGAACTGTGA 849 0.3769 MEVTDFQGDDEFYTEVEIISNLKHRNLVPLRGCCVVDEDHNQEHRNRYLVYDYMPNGNLEDHLFPSMENEKKLLTWPQRKNIIFDVANALVYLHFGVKPAIYHRDIKATNILLDADMRARVADFGLAKESSESRSQLNTRVAGTYGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALELSSSGTPKFLITDWVWSLMKTGNIADALDVSIKSSNSRNIMERFLLVGILCSHVIGDSRPTILDGLRMLEGDIEVPSIPDRPMTLEHHINMFTNANSVEL 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme36432g00001 282 SMART serkin_6 1 237 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme36432g00001 282 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 7 267 - -
Trme36432g00001 282 Pfam Protein kinase domain 10 196 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme36432g00001 282 ProSitePatterns Serine/Threonine protein kinases active-site signature. 101 113 IPR008271 GO:0004672|GO:0006468
Trme36432g00001 282 SUPERFAMILY Protein kinase-like (PK-like) 10 273 IPR011009 -
Trme36432g00001 282 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 54 259 - -
Trme36432g00001 282 Gene3D Phosphorylase Kinase; domain 1 1 54 - -
Trme36432g00001 282 ProSiteProfiles Protein kinase domain profile. 1 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme36432g00001 282 Gene3D Transferase(Phosphotransferase) domain 1 55 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme36432g00001 Trme-Chr36432 78 926 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme36432g00001 4 269 Receptor kinase-like Gene Family AT1G11050 71.795 2.54e-137 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Trme36432g00001 Pkinase 1.6e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme36432g00001 - - gmx:100788367 414.846