Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme36425g00001 ATGTGGCAGATAATTGAAGTTTTACAGTTCATTGGTAAGAAAGAAGGGCTGCAACTTCCTCCTAGTCTTGCTGCTCGCATAGCAGAGAAATCAAATCGGAATTTAAGGAGGGCTATATTGTCATTTGAGACTTGCCGCGTCCAACAGTATCCTTTCACTGACAAGCAAACAATTCCCCCAATGGATTGGGAGGAATATATTTCTGAAATTGCATCTGACATAATGAAAGAACAGAGCCCAAAAAGGTTGTTTCTAGTTCGGGGAAAGTTGTATGAGCTGCTGATCAATTGCATTCCTCCGGAGATCATTTTGAAGAGGCTTCTTTATGAGCTATTGAGGAAACTAGATGCAGAACTGAAGCATGAAGTCTGTCATTGGGCAGCATACTAT 390 0.4128 MWQIIEVLQFIGKKEGLQLPPSLAARIAEKSNRNLRRAILSFETCRVQQYPFTDKQTIPPMDWEEYISEIASDIMKEQSPKRLFLVRGKLYELLINCIPPEIILKRLLYELLRKLDAELKHEVCHWAAYY 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme36425g00001 130 Gene3D - 62 130 - -
Trme36425g00001 130 Gene3D - 2 59 - -
Trme36425g00001 130 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 3 130 - -
Trme36425g00001 130 SUPERFAMILY post-AAA+ oligomerization domain-like 61 130 IPR008921 GO:0003677|GO:0006260
Trme36425g00001 130 FunFam replication factor C subunit 3 1 58 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme36425g00001 3 130 Core DNA Replication Machinery Family AT5G27740 76.562 1.38e-71 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme36425g00001 K10756 - gmx:100818329 235.343