Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme36405g00001 AGGTACATAAGAGAAGAAGAGGTGTCAAATCTTGTTAAATCAATATCTGCAAGTGAAGGATCAGTTGTTAACCTCACTCAGAAGATTTTGGCAACGACATATGGGATAACAGCGCGGACAGCTTTTGGGAAAAGGAATATACATCAAGAAGCGGCGAAGACCAAACTTGAAAAAGCTCAAAGAGATCTTGATATAATATTGCAAGACATCATCGATGATCATAAAAGCAGTGGTAAAGAAGAAAGCAAGGATGAAGATCTAGTTGATGTTCTTCTCAATATTCAACAAGAAAGTTATCACTCACAGCATCCCTTGACCGATAATAATTTGAAAGCAGTCATTCAGGACTTGTTCACTGGTGGTGGTGAAACATCGTCAGGGGTTATGTTATGGGGAATGTCTGAGATGGTAAGAAACCCAAAAGTGATGGAAGAAGCACAAGCTGAGGTAAGAAGAGTGTTTGATGAAAAGGGTTTTGTGGACGAGACAGAGTTGCACCGATTGATATACTTAAAGTCTATGATCAAAGAAACAATGAGGCTACATCCTACCCTACCGCTGTTACTTCCAAGAGAAAGTAGAGACAGGTGCCAAATCAATGGATATGAGATCCCAGCAAAGACAAGGGTCATGATCAACGCTTGGGCTATTGGAAGAGATCCAAGGTATTGGGTTGAAGCTGAGAATTTTAAACCTGAAAGGTTTGTAAATAGCCTTATTGATTTCAAAGGCACAGACTTTGAATATATACCATTTGGTGCGGGAAGGAGGATGTGTCCTGGCATTGCATTTGCCATACCCAACGTTGAACTGCCTCTTGCTAAGTTACTTTACCACTTTGATTGGAAGCTTCCCAATGGAATGAAGAATGAAGAACTTGATATGA 886 0.4018 RYIREEEVSNLVKSISASEGSVVNLTQKILATTYGITARTAFGKRNIHQEAAKTKLEKAQRDLDIILQDIIDDHKSSGKEESKDEDLVDVLLNIQQESYHSQHPLTDNNLKAVIQDLFTGGGETSSGVMLWGMSEMVRNPKVMEEAQAEVRRVFDEKGFVDETELHRLIYLKSMIKETMRLHPTLPLLLPRESRDRCQINGYEIPAKTRVMINAWAIGRDPRYWVEAENFKPERFVNSLIDFKGTDFEYIPFGAGRRMCPGIAFAIPNVELPLAKLLYHFDWKLPNGMKNEELDM 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme36405g00001 295 Gene3D Cytochrome P450 1 294 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme36405g00001 295 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 252 261 IPR017972 GO:0005506|GO:0016705
Trme36405g00001 295 PANTHER OS08G0105600 PROTEIN 51 295 - -
Trme36405g00001 295 SUPERFAMILY Cytochrome P450 3 289 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme36405g00001 295 Pfam Cytochrome P450 53 290 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme36405g00001 295 FunFam Predicted protein 118 295 - -
Trme36405g00001 295 Coils Coil 49 69 - -
Trme36405g00001 295 PRINTS E-class P450 group I signature 32 50 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme36405g00001 295 PRINTS E-class P450 group I signature 249 259 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme36405g00001 295 PRINTS E-class P450 group I signature 259 282 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme36405g00001 295 PRINTS E-class P450 group I signature 172 190 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme36405g00001 295 PRINTS E-class P450 group I signature 213 237 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme36405g00001 295 PRINTS P450 superfamily signature 173 184 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme36405g00001 295 PRINTS P450 superfamily signature 120 137 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme36405g00001 295 PRINTS P450 superfamily signature 250 259 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme36405g00001 295 PRINTS P450 superfamily signature 259 270 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme36405g00001 Trme-Chr36405 1 1087 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme36405g00001 1 295 Cytochrome P450 AT3G26210 41.246 5.93e-82 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme36405g00001 - - mtr:11442302 467.233