Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme36376g00001 ATGTATGGGTTACAAAGTGTGCACTTGAGTTTACAATCTCCAAACCTTCCTGATCTGTATCTCTTAGCTTTTAAGCATGATGCTGCTTGCCGTGTGATTGCAAGACTTAAAAAGGAACGAGACGAAGCTAGGTCTATACTTGCACAGGCAGAAAGGCAGTTCCCGATTTCTACACCAAATGATGCGACTGCAAATGCTCCTGTTCATAGCAATGGGAAAAGAG 223 0.4305 MYGLQSVHLSLQSPNLPDLYLLAFKHDAACRVIARLKKERDEARSILAQAERQFPISTPNDATANAPVHSNGKR 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme36376g00001 74 PANTHER PRE-MRNA-PROCESSING FACTOR 19 25 67 IPR038959 GO:0000398|GO:0000974|GO:0006281|GO:0061630
Trme36376g00001 74 MobiDBLite consensus disorder prediction 52 74 - -
Trme36376g00001 74 Pfam Prp19/Pso4-like 24 49 IPR013915 -
Trme36376g00001 74 Coils Coil 33 53 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme36376g00001 24 74 U-box Gene Family AT1G04510 68.627 2.80e-16 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme36376g00001 K10599 - gmx:100527039 90.1225