Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme36361g00001 ATGGAAGATAAGATGCAACATAACCCCCCTAACAACACTCCAACCCAACATGGTTCCGAGAAAACTGAACCGGTTAGGTCAAGATGGACACCAAAACCAGAACAAATTCTCATACTTGAATCCATCTTCAATAGTGGTATGGTTAATCCACCAAAAGAAGAAACTATCAAAATAAGAAAACTTCTTGAAAAATTTGGCAACGTCGGCGACGCGAACGTTTTTTACTGGTTTCAAAACCGCCGGTCTAGATCTCGTCGCCGACAACGCCAGATGCAACAAGCAACACTTGATCAACAAAAAAATCAGATGTTGATGATGCAACAACCTCAACAAGTTGTTGTTAATGATGGTGCAAGTGCAACTGCAAGTGCAATGAATAATTCATGTGATATGGTTCAAACTAATTATCCAATAATGGGTGGTTTTGGTGGTGGTTCTTCTTGTTTGAATGATTCTTCTGGTTCTTCTTCTTCTTCATCATGTGGTGGTGTTCTTAGTGGTCAACAAGGAATGGATGGTTTCTTTTCAGTTTCTTCTCAAATGGGTTTTCTTGGAATTGATCAAACTTTGACTCCATCTTCACTTTTGTGCCCTCCTTTTTCTTCCAATTTGAACTATCACTCTGAATTTCTATAA 636 0.3884 MEDKMQHNPPNNTPTQHGSEKTEPVRSRWTPKPEQILILESIFNSGMVNPPKEETIKIRKLLEKFGNVGDANVFYWFQNRRSRSRRRQRQMQQATLDQQKNQMLMMQQPQQVVVNDGASATASAMNNSCDMVQTNYPIMGGFGGGSSCLNDSSGSSSSSSCGGVLSGQQGMDGFFSVSSQMGFLGIDQTLTPSSLLCPPFSSNLNYHSEFL 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme36361g00001 211 PANTHER WUSCHEL-RELATED HOMEOBOX 11 1 207 IPR044558 GO:0003700|GO:0048830
Trme36361g00001 211 SUPERFAMILY Homeodomain-like 19 93 IPR009057 -
Trme36361g00001 211 Pfam Homeodomain 26 86 IPR001356 GO:0003677
Trme36361g00001 211 SMART HOX_1 24 91 IPR001356 GO:0003677
Trme36361g00001 211 MobiDBLite consensus disorder prediction 1 29 - -
Trme36361g00001 211 Gene3D - 24 95 - -
Trme36361g00001 211 ProSiteProfiles 'Homeobox' domain profile. 22 87 IPR001356 GO:0003677
Trme36361g00001 211 FunFam WUSCHEL-related homeobox 11 26 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme36361g00001 Trme-Chr36361 155 899 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme36361g00001 12 79 Wox Gene Family AT3G03660 72.727 1.30e-34 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Trme36361g00001 Homeodomain 5.7e-14 CL0123