Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme36340g00001 ACTGGTGGAGAAAGCATATATGGTTCAAACTTCCCAGACGAGTCACCAAGGCTTAAGCATGATGCCCCTGGGCTTTTGTCGATGGCGATTGCGGACCGTGACACACTTGGTTCTCATTTTATGATCACTTTGAAAGCAGATCATCATCTTGATAGGAAGCATGTAGTCTTTGGGAAGCTTGTTGAAGGGCATCATGTATTGAAGAGAATTGAAGATGTGGGCGATGATGAAGGACATCCAGCTGTAACTGTTAAAATCATTAATTGTGGTGAATATAATGATGACGAAGAAAGAGAAAGAGAAAGAGAAAGAGATCCAAGAAACGCGGAAGAAGGAGAGATAAACGCCAAATGTCTGCCCCTTCAAAAAGGGCAGTAA 378 0.4259 TGGESIYGSNFPDESPRLKHDAPGLLSMAIADRDTLGSHFMITLKADHHLDRKHVVFGKLVEGHHVLKRIEDVGDDEGHPAVTVKIINCGEYNDDEERERERERDPRNAEEGEINAKCLPLQKGQ 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme36340g00001 125 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 91 - -
Trme36340g00001 125 Gene3D - 1 93 IPR029000 -
Trme36340g00001 125 MobiDBLite consensus disorder prediction 90 112 - -
Trme36340g00001 125 SUPERFAMILY Cyclophilin-like 1 96 IPR029000 -
Trme36340g00001 125 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 39 51 IPR002130 GO:0000413|GO:0003755
Trme36340g00001 125 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 52 67 IPR002130 GO:0000413|GO:0003755
Trme36340g00001 125 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 24 39 IPR002130 GO:0000413|GO:0003755
Trme36340g00001 125 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 1 91 IPR002130 GO:0000413|GO:0003755
Trme36340g00001 125 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 6 90 IPR002130 GO:0000413|GO:0003755
Trme36340g00001 125 MobiDBLite consensus disorder prediction 90 125 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme36340g00001 2 87 U-box Gene Family AT5G67530 43.182 1.24e-12 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme36340g00001 K09566 - gmx:100800303 174.096