Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme36332g00001 ATGCCACCATTGATTTCATCACCATCCTCTCATGGAATCAGAAGCCTCTCAGACCTTGAAAAAGTAGCAGTACTAGGCCATGGAAATGGTGGAATAGTCTACAAAGTTCATCACAAGAAGAATAATTCATTTTATGCATTGAAAGTTTTAAACTTTGATCGAAATGGTATTGGATTTCGACAACCACCAACACTAGAAGCTGAGATTCTCAAAAGGGTCGTTGATTCACCTTATATT 237 0.3755 MPPLISSPSSHGIRSLSDLEKVAVLGHGNGGIVYKVHHKKNNSFYALKVLNFDRNGIGFRQPPTLEAEILKRVVDSPYI 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme36332g00001 79 ProSiteProfiles Protein kinase domain profile. 19 79 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme36332g00001 79 ProSitePatterns Protein kinases ATP-binding region signature. 25 48 IPR017441 GO:0005524
Trme36332g00001 79 SUPERFAMILY Protein kinase-like (PK-like) 11 79 IPR011009 -
Trme36332g00001 79 Gene3D Phosphorylase Kinase; domain 1 4 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme36332g00001 Trme-Chr36332 11 247 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme36332g00001 15 79 MAP Kinase Kinase Gene Family AT1G73500 56.923 1.42e-14 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme36332g00001 K20604 - mtr:11424831 138.272