Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme36325g00001 ATGAGTTTGTTTCAATCTACACGCACTTCTGTATTGTGCAGGTGTGAATCAGAACATAAGTTTATTGGAAAGATAGTTGACGAGATCTCTATAAATATCAAGCGTGTTCCTTTACATGTTGCAAAGAAACCAGTAGGCTTGGAGTCTCAAATGTTAGAAGTAACATATCTCCTTGGACTTGAGTCTGATGAGAGAGTCAACATGGTTGGCATTTATGGAATCGGCGGAATAGGAAAATCAACAATTGCTCGTTCTGTGCATAACTTGATTGCTGATCAATTNCACCTTCAAGAAACACTACTTTCTGACATACTTGGGGAAAAAGATATTAAAGTAGGAGATGTTTACAGGGGAATTTCAATAATTAAAAGGAGGCTTCAAAGAAAGAAAGTCCTTTTGATTCTTGATAATGTTGACAAAGAAAAGCAATTACAGGCACTTGTAGGAGGATATGATTGGTTTGGCTTCGGCAGCAAGATCATAATCACTACAAGAGGCAAGCATTTGCTGGCTACTCATGGGATTGTGAAAGTATATGAGGTTAAACAGCTTAAATACGAAAAGGCTCTTGAATTATTTAGTTGGCATGCATTTAAAAATAAAAAAATTGATCCAGGTTATGAGAATATTGCAAGACGTGCAGTATCTTATTGTGATGGTCTTCCCTTGGCTTTGGAGGTGATAGGTTCTCAATTTTTTGGAAAAAGTTTAGCTATATGGAAATCCTCTTTAGATAAATATGAAAGAGTCATTCGTAAAGACATCCATGAAGTTCTGAAAGCTAGTTATGATGATTTGGAAGAAGATGAGAAGG 814 0.3612 MSLFQSTRTSVLCRCESEHKFIGKIVDEISINIKRVPLHVAKKPVGLESQMLEVTYLLGLESDERVNMVGIYGIGGIGKSTIARSVHNLIADQXHLQETLLSDILGEKDIKVGDVYRGISIIKRRLQRKKVLLILDNVDKEKQLQALVGGYDWFGFGSKIIITTRGKHLLATHGIVKVYEVKQLKYEKALELFSWHAFKNKKIDPGYENIARRAVSYCDGLPLALEVIGSQFFGKSLAIWKSSLDKYERVIRKDIHEVLKASYDDLEEDEK 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme36325g00001 271 Gene3D - 183 267 IPR042197 -
Trme36325g00001 271 Pfam NB-ARC domain 95 263 IPR002182 GO:0043531
Trme36325g00001 271 PRINTS Disease resistance protein signature 68 83 - -
Trme36325g00001 271 PRINTS Disease resistance protein signature 218 232 - -
Trme36325g00001 271 PRINTS Disease resistance protein signature 125 139 - -
Trme36325g00001 271 Gene3D - 93 178 IPR027417 -
Trme36325g00001 271 Gene3D - 24 92 IPR027417 -
Trme36325g00001 271 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 19 270 IPR044974 GO:0006952
Trme36325g00001 271 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 271 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme36325g00001 Trme-Chr36325 175 988 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme36325g00001 45 271 WRKY Transcription Factor Family AT5G45050 30.488 2.36e-26 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme36325g00001 - - vvo:131631893 415.231